[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 24 items for (author: chacon & p)

EMDB-13177:
Ser40 phosphorylated tyrosine hydroxylase
Method: single particle / : Bueno-Carrasco MT, Cuellar J

EMDB-13442:
Partial structure of tyrosine hydroxylase lacking the first 35 residues in complex with dopamine.
Method: single particle / : Bueno-Carrasco MT, Cuellar J, Santiago C, Valpuesta JM, Martinez A, Flydal MI

EMDB-11309:
Partial structure of tyrosine hydroxylase in complex with dopamine showing the catalytic domain and an alpha-helix from the regulatory domain involved in dopamine binding.
Method: single particle / : Bueno-Carrasco MT, Cuellar J, Santiago C, Valpuesta JM, Martinez A, Flydal MI

EMDB-11624:
Full-length structure of the substrate-free tyrosine hydroxylase (apo-TH).
Method: single particle / : Bueno-Carrasco MT, Cuellar J, Santiago C, Flydal MI, Martinez A, Valpuesta JM

EMDB-11467:
Atomic model of the EM-based structure of the full-length tyrosine hydroxylase in complex with dopamine (residues 40-497) in which the regulatory domain (residues 40-165) has been included only with the backbone atoms
Method: single particle / : Bueno-Carrasco MT, Cuellar J, Santiago C, Valpuesta JM, Martinez A, Flydal MI

EMDB-11587:
Partial structure of the substrate-free tyrosine hydroxylase (apo-TH).
Method: single particle / : Bueno-Carrasco MT, Cuellar J, Santiago C, Valpuesta JM, Martinez A, Flydal MI

EMDB-11328:
SARS-CoV-2 spike in prefusion state
Method: single particle / : Martinez M, Marabini R, Carazo JM

EMDB-11336:
SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up closed conformation)
Method: single particle / : Martinez M, Marabini R, Carazo JM

EMDB-11337:
SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up open conformation)
Method: single particle / : Martinez M, Marabini R, Carazo JM

EMDB-11341:
SARS-CoV-2 stabilized spike in prefusion state (1-up conformation)
Method: single particle / : Martinez M, Marabini R, Carazo JM

PDB-6zow:
SARS-CoV-2 spike in prefusion state
Method: single particle / : Martinez M, Marabini R, Carazo JM

PDB-6zp5:
SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up closed conformation)
Method: single particle / : Martinez M, Marabini R, Carazo JM

PDB-6zp7:
SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up open conformation)
Method: single particle / : Martinez M, Marabini R, Carazo JM

EMDB-7055:
Cryo-EM structure of the NAIP5-NLRC4-flagellin inflammasome
Method: single particle / : Tenthorey JL, Haloupek N

PDB-6b5b:
Cryo-EM structure of the NAIP5-NLRC4-flagellin inflammasome
Method: single particle / : Tenthorey JL, Haloupek N, Lopez-Blanco JR, Grob P, Adamson E, Hartenian E, Lind NA, Bourgeois NM, Chacon P, Nogales E, Vance RE

EMDB-8266:
Near-atomic cryo-EM structure of PRC1 bound to the microtubule
Method: helical / : Kellogg EH, Howes S

PDB-5kmg:
Near-atomic cryo-EM structure of PRC1 bound to the microtubule
Method: helical / : Kellogg EH, Howes S, Ti SC, Ramirez-Aportela E, Kapoor TM, Chacon P, Nogales E

PDB-5fur:
Structure of human TFIID-IIA bound to core promoter DNA
Method: single particle / : Louder RK, He Y, Lopez-Blanco JR, Fang J, Chacon P, Nogales E

EMDB-3304:
Structure of human TFIID-IIA bound to core promoter DNA
Method: single particle / : Louder RK, He Y, Lopez-Blanco JR, Fang J, Chacon P, Nogales E

EMDB-3305:
Structure of human TFIID-IIA bound to core promoter DNA (locally-refined BC core)
Method: single particle / : Louder RK, He Y, Lopez-Blanco JR, Fang J, Chacon P, Nogales E

EMDB-3306:
Structure of human TFIID-IIA bound to core promoter DNA (locally-refined lobe C)
Method: single particle / : Louder RK, He Y, Lopez-Blanco JR, Fang J, Chacon P, Nogales E

EMDB-3307:
Structure of the human TAF-less PIC in the closed state
Method: single particle / : Louder RK, He Y, Lopez-Blanco JR, Fang J, Chacon P, Nogales E

PDB-3j47:
Formation of an intricate helical bundle dictates the assembly of the 26S proteasome lid
Method: single particle / : Estrin E, Lopez-Blanco JR, Chacon P, Martin A

EMDB-2865:
Architecture of the yeast pontin-reptin complex
Method: single particle / : Torreira E, Jha S, Lopez-Blanco JR, Arias-Palomo E, Chacon P, Canas C, Ayora S, Dutta A, Llorca O

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more